Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548k in SRS Ovarian Hendrix Cluster 16 Table contains all genes in the SRS Ovarian Hendrix cluster number 16. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548k 4259 MGST3 microsomal glutathione S-transferase 3 [Source:HGNC Symbol;Acc:7064] zzz999 27330 RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6 [Source:HGNC Symbol;Acc:10435] T 9917 FAM20B family with sequence similarity 20, member B [Source:HGNC Symbol;Acc:23017] T 9856 KIAA0319 KIAA0319 [Source:HGNC Symbol;Acc:21580] T 50862 RNF141 ring finger protein 141 [Source:HGNC Symbol;Acc:21159] T 4548 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:7468] T 23029 RBM34 RNA binding motif protein 34 [Source:HGNC Symbol;Acc:28965] zzz999 5395 PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:9122] zzz999 113419 TEX261 testis expressed 261 [Source:HGNC Symbol;Acc:30712] T 51315 KRCC1 lysine-rich coiled-coil 1 [Source:HGNC Symbol;Acc:28039] zzz999 60626 RIC8A resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) [Source:HGNC Symbol;Acc:29550] T 10782 ZNF274 zinc finger protein 274 [Source:HGNC Symbol;Acc:13068] zzz999 55128 TRIM68 tripartite motif containing 68 [Source:HGNC Symbol;Acc:21161] T 54543 TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:HGNC Symbol;Acc:21648] T 8082 SSPN sarcospan (Kras oncogene-associated gene) [Source:HGNC Symbol;Acc:11322] zzz999 3964 LGALS8 lectin, galactoside-binding, soluble, 8 [Source:HGNC Symbol;Acc:6569] zzz999 8661 EIF3A eukaryotic translation initiation factor 3, subunit A [Source:HGNC Symbol;Acc:3271] zzz999 8324 FZD7 frizzled homolog 7 (Drosophila) [Source:HGNC Symbol;Acc:4045] P T 57415 C3orf14 chromosome 3 open reading frame 14 [Source:HGNC Symbol;Acc:25024] zzz999 79673 ZNF329 zinc finger protein 329 [Source:HGNC Symbol;Acc:14209] zzz999 163590 TOR1AIP2 torsin A interacting protein 2 [Source:HGNC Symbol;Acc:24055] T 4289 MKLN1 muskelin 1, intracellular mediator containing kelch motifs [Source:HGNC Symbol;Acc:7109] T 374868 ATP9B ATPase, class II, type 9B [Source:HGNC Symbol;Acc:13541] zzz999 25913 POT1 protection of telomeres 1 homolog (S. pombe) [Source:HGNC Symbol;Acc:17284] T 10892 MALT1 mucosa associated lymphoid tissue lymphoma translocation gene 1 [Source:HGNC Symbol;Acc:6819] zzz999 1027 CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) [Source:HGNC Symbol;Acc:1785] zzz999 80115 BAIAP2L2 BAI1-associated protein 2-like 2 [Source:HGNC Symbol;Acc:26203] zzz999 27241 BBS9 Bardet-Biedl syndrome 9 [Source:HGNC Symbol;Acc:30000] zzz999 51272 BET1L blocked early in transport 1 homolog (S. cerevisiae)-like [Source:HGNC Symbol;Acc:19348] T 8793 TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain [Source:HGNC Symbol;Acc:11907] zzz999 55825 PECR peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:18281] T 54969 C4orf27 chromosome 4 open reading frame 27 [Source:HGNC Symbol;Acc:26051] zzz999 6462 SHBG sex hormone-binding globulin [Source:HGNC Symbol;Acc:10839] zzz999 3642 INSM1 insulinoma-associated 1 [Source:HGNC Symbol;Acc:6090] zzz999 978 CDA cytidine deaminase [Source:HGNC Symbol;Acc:1712] zzz999 79020 C7orf25 chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:21703] zzz999 51719 CAB39 calcium binding protein 39 [Source:HGNC Symbol;Acc:20292] T 5321 PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) [Source:HGNC Symbol;Acc:9035] zzz999 26994 RNF11 ring finger protein 11 [Source:HGNC Symbol;Acc:10056] T 23161 SNX13 sorting nexin 13 [Source:HGNC Symbol;Acc:21335] zzz999 55973 BCAP29 B-cell receptor-associated protein 29 [Source:HGNC Symbol;Acc:24131] zzz999 80254 CEP63 centrosomal protein 63kDa [Source:HGNC Symbol;Acc:25815] T 3848 KRT1 keratin 1 [Source:HGNC Symbol;Acc:6412] zzz999 10743 RAI1 retinoic acid induced 1 [Source:HGNC Symbol;Acc:9834] zzz999 51375 SNX7 sorting nexin 7 [Source:HGNC Symbol;Acc:14971] zzz999 539 ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit [Source:HGNC Symbol;Acc:850] zzz999 8935 SKAP2 src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:15687] T 54148 MRPL39 mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:14027] zzz999 26240 FAM50B family with sequence similarity 50, member B [Source:HGNC Symbol;Acc:18789] T 27072 VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:12713] T 26092 TOR1AIP1 torsin A interacting protein 1 [Source:HGNC Symbol;Acc:29456] zzz999 2913 GRM3 glutamate receptor, metabotropic 3 [Source:HGNC Symbol;Acc:4595] zzz999 5575 PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta [Source:HGNC Symbol;Acc:9390] zzz999 55907 CMAS cytidine monophosphate N-acetylneuraminic acid synthetase [Source:HGNC Symbol;Acc:18290] zzz999 1215 CMA1 chymase 1, mast cell [Source:HGNC Symbol;Acc:2097] zzz999 10473 HMGN4 high mobility group nucleosomal binding domain 4 [Source:HGNC Symbol;Acc:4989] T 51019 CCDC53 coiled-coil domain containing 53 [Source:HGNC Symbol;Acc:24256] zzz999 54943 DNAJC28 DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:HGNC Symbol;Acc:1297] zzz999 4153 MBL2 mannose-binding lectin (protein C) 2, soluble [Source:HGNC Symbol;Acc:6922] zzz999 6119 RPA3 replication protein A3, 14kDa [Source:HGNC Symbol;Acc:10291] zzz999 5525 PPP2R5A protein phosphatase 2, regulatory subunit B', alpha [Source:HGNC Symbol;Acc:9309] zzz999 51650 MRPS33 mitochondrial ribosomal protein S33 [Source:HGNC Symbol;Acc:16634] zzz999 7360 UGP2 UDP-glucose pyrophosphorylase 2 [Source:HGNC Symbol;Acc:12527] P T 6050 RNH1 ribonuclease/angiogenin inhibitor 1 [Source:HGNC Symbol;Acc:10074] zzz999 10542 HBXIP hepatitis B virus x interacting protein [Source:HGNC Symbol;Acc:17955] zzz999 55297 CCDC91 coiled-coil domain containing 91 [Source:HGNC Symbol;Acc:24855] zzz999 7447 VSNL1 visinin-like 1 [Source:HGNC Symbol;Acc:12722] zzz999 9839 ZEB2 zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:14881] P T 27247 NFU1 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16287] zzz999 8883 NAE1 NEDD8 activating enzyme E1 subunit 1 [Source:HGNC Symbol;Acc:621] zzz999 51652 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29865] T 5147 PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta [Source:HGNC Symbol;Acc:8788] zzz999 22911 WDR47 WD repeat domain 47 [Source:HGNC Symbol;Acc:29141] T 161 AP2A2 adaptor-related protein complex 2, alpha 2 subunit [Source:HGNC Symbol;Acc:562] zzz999 1200 TPP1 tripeptidyl peptidase I [Source:HGNC Symbol;Acc:2073] T 10311 DSCR3 Down syndrome critical region gene 3 [Source:HGNC Symbol;Acc:3044] T 79901 CYBRD1 cytochrome b reductase 1 [Source:HGNC Symbol;Acc:20797] T 55146 ZDHHC4 zinc finger, DHHC-type containing 4 [Source:HGNC Symbol;Acc:18471] zzz999 23075 SWAP70 SWAP switching B-cell complex 70kDa subunit [Source:HGNC Symbol;Acc:17070] zzz999 51097 SCCPDH saccharopine dehydrogenase (putative) [Source:HGNC Symbol;Acc:24275] zzz999 5965 RECQL RecQ protein-like (DNA helicase Q1-like) [Source:HGNC Symbol;Acc:9948] T 9320 TRIP12 thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:12306] zzz999

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